Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 5e-30
 Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 11/267 (4%)

Query: 1   MQLFGQRLGRFSVKTLL-TGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMS-TFVPWAM 58
           M  F + L   S+  LL  GLL  AF           L  I+E+G + VG+  T+ P++ 
Sbjct: 1   MSKFAKPLLNASLALLLGAGLLSQAFA-------GEQLKTIQEKGVINVGLEGTYPPFSF 53

Query: 59  RDKQGELIGFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSK 118
           +D+ G+L GFE+++++ LA + G + +  PT WDGI+ AL +K+ DV++  ++++ ER K
Sbjct: 54  QDENGKLTGFEVELSELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKK 113

Query: 119 SVLFTAPYSHSGVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVL 178
              F+ PY+ SG+Q    KK AE        +    K+    G    Q  ++  P+A V 
Sbjct: 114 KYDFSEPYTVSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQADVR 173

Query: 179 QFDDDAQAFQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEE 238
            ++DD   F ++ NG   A++         + K  D+      +  S+     A+R GE 
Sbjct: 174 TYEDDPSKFADLRNGRIDAILIDRLAALEYAQKAKDTELA--GDAFSRLESGVALRKGEP 231

Query: 239 DKKAFFDQWIADRTADGWLQARYEYWF 265
           +  A  ++ I    ADG L    E +F
Sbjct: 232 ELLAAINKAIDKLKADGTLAKLSEKYF 258