Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., cystine ABC transporter substrate-binding protein from Pseudomonas protegens RBAN4

 Score =  116 bits (291), Expect = 4e-31
 Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 12/263 (4%)

Query: 11  FSV--KTLLTGLLGLAFTL----PAVASDTPNLDAIKERGTLRVGMS-TFVPWAMRDKQG 63
           FSV  + LL G LGLA        AVA +   L  IK+ G + VG+  T+ P++  D+ G
Sbjct: 3   FSVLRRNLLIGTLGLALGAGLMGQAVAGE--QLQKIKDAGVINVGLEGTYPPFSYVDENG 60

Query: 64  ELIGFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFT 123
           +L GFE++ ++ LA   G +V+  PT WDGI+ AL +K+ D ++  ++++ ER K   F+
Sbjct: 61  KLTGFEVEFSEALANKLGVKVKLQPTKWDGILAALESKRLDAVVNQVTISEERKKKYDFS 120

Query: 124 APYSHSGVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDD 183
            PY+ SG+Q    KK    F    D      K+    G    Q  ++  P A +  +DDD
Sbjct: 121 IPYTVSGIQALTQKKDEGKFKTAADLGGH--KVGVGLGTNYEQWLKDNVPTAIIKTYDDD 178

Query: 184 AQAFQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKAF 243
              +Q++  G   A++        E IK +    +   E  S+     A+R GE +  A 
Sbjct: 179 PTKYQDLRVGRIEAILVDR-LAAFELIKKTKDTLVVSGEPFSRQEAGVALRKGEPELLAA 237

Query: 244 FDQWIADRTADGWLQARYEYWFS 266
            ++ I +  ADG L+   E +F+
Sbjct: 238 VNKAIEELRADGTLKKLSEKYFN 260