Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., transporter substrate-binding domain-containing protein from Pseudomonas fluorescens SBW25

 Score =  108 bits (269), Expect = 2e-28
 Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 2/238 (0%)

Query: 38  DAIKERGTLRVGMS-TFVPWAMRDKQGELIGFEIDVAKRLAADSGWQVEFVPTAWDGIIP 96
           DA++ RG L+VG + T+VP+ M DKQG ++GFEID+ K ++   G ++E V   +  ++ 
Sbjct: 29  DAVR-RGALKVGTTPTYVPFEMTDKQGRIVGFEIDLLKVMSQALGVELELVTVPYTELVA 87

Query: 97  ALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQLAANKKLAEGFTQLEDFNKRNVKI 156
            L AKKFD+I  GM+VT ER+  + F+  +   G  +  + +L    + +ED +  + +I
Sbjct: 88  GLQAKKFDLIGSGMTVTQERNLKLNFSDSFIVVGQSVVLHPRLLGKVSSVEDLDDASYRI 147

Query: 157 AARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAVIASSPKPEHESIKHSDSL 216
           A   G      AR     A +  F    +  ++V+ G A A I  +P       +  +S 
Sbjct: 148 ATTEGTTGEAAARRFLGAARISSFATPEEGVRQVLAGAADAFIHDAPYNLIALSRPENST 207

Query: 217 FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGWLQARYEYWFSTLDWQDQI 274
            L   +  +    AF ++ G+ D   + + ++     DG     ++ WF   DW  +I
Sbjct: 208 LLALEQPFTFEPLAFGLKKGDFDSLNWINHFLNQVAQDGTYDRLHDKWFKDTDWWVEI 265