Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., Arginine ABC transporter, periplasmic arginine-binding protein ArtI from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 22/258 (8%)

Query: 13  VKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMSTFVPWAMRDKQGELIGFEIDV 72
           +K +L   L   F+L A A+ T                +++ P+   D   +++GF++D+
Sbjct: 1   MKKVLIAALIAGFSLSATAAQTIRFAT----------EASYPPFESMDANNKIVGFDVDL 50

Query: 73  AKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQ 132
           A  L  +      F   A+D +IP+L  ++FD ++ GM +TPER K VLFT PY  +   
Sbjct: 51  ANALCKEIDASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFTTPYYDNSAL 110

Query: 133 LAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVIN 192
               +       QL     +  K+  + G    +   +  P+ + + +D    A  ++ N
Sbjct: 111 FVGQQGKYTSVDQL-----KGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQN 165

Query: 193 GNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNE-----AFAVRLGEEDKKAFFDQW 247
           G   AV   +     E +K +  L  P  ++++  +        AVR G  + +  F+  
Sbjct: 166 GRIDAVFGDTAVVT-EWLKANPKL-APVGDKVTDKDYFGTGLGIAVRQGNTELQQKFNTA 223

Query: 248 IADRTADGWLQARYEYWF 265
           +     DG  +  Y  WF
Sbjct: 224 LEKVKKDGTYETIYNKWF 241