Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., Arginine ABC transporter, periplasmic arginine-binding protein ArtJ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 24/259 (9%)

Query: 13  VKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMSTFVPWAMRDKQGELIGFEIDV 72
           +K L+   L  +F   ++A++  N              +T+ P+   D   +++GF+ID+
Sbjct: 1   MKKLVLAALLASFATGSIAAEKINFGV----------SATYPPFESLDASNKIVGFDIDL 50

Query: 73  AKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQ 132
           A  L      +  F   A+D +IPAL  +K+D +I GM +TPERSK V F+ PY  +   
Sbjct: 51  ATALCKQMQAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSNPYYANSAL 110

Query: 133 LAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVIN 192
           + A K   + FT L     +  +I    G    +  ++  P+   + +D    A  ++ N
Sbjct: 111 VIAKKDTYKTFTDL-----KGKRIGMENGTTHQKYLQDKHPEVKTVAYDSYQNAIIDLKN 165

Query: 193 GNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLG---EEDKKAFFDQW-- 247
           G    V   +    +E +K +  L  P +E+++   + F   LG     D KA  ++   
Sbjct: 166 GRIDGVFGDT-AVVNEWLKTNPQLG-PATEKVT-DPQYFGTGLGIAVRPDNKALLEKLNN 222

Query: 248 -IADRTADGWLQARYEYWF 265
            +A   ADG  Q   + WF
Sbjct: 223 ALAAIKADGTYQKISDQWF 241