Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., arginine transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 24/259 (9%)

Query: 13  VKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMSTFVPWAMRDKQGELIGFEIDV 72
           +K L+   L  +FT  A A++  N              +T+ P+       E++GF+ID+
Sbjct: 1   MKKLVLAALLASFTFGASAAEKINFGV----------SATYPPFESIGANNEIVGFDIDL 50

Query: 73  AKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQ 132
           AK L      +  F   A+D +IP+L  +K+D +I GM +TPERSK V FT PY  +   
Sbjct: 51  AKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAV 110

Query: 133 LAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVIN 192
           + A K   + F  L     +  +I    G    +  ++  P+   + +D    AF ++ N
Sbjct: 111 VIAKKDTYKTFADL-----KGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKN 165

Query: 193 GNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLG---EEDKKAFFDQW-- 247
           G    V   +    +E +K +  L +  +E+++   + F   LG     D KA  ++   
Sbjct: 166 GRIDGVFGDT-AVVNEWLKTNPQLGVA-TEKVT-DPQYFGTGLGIAVRPDNKALLEKLNN 222

Query: 248 -IADRTADGWLQARYEYWF 265
            +A   ADG  Q   + WF
Sbjct: 223 ALAAIKADGTYQKISDQWF 241