Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., transporter substrate-binding domain-containing protein from Erwinia tracheiphila SCR3

 Score = 92.8 bits (229), Expect = 7e-24
 Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 5/253 (1%)

Query: 18  TGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMS-TFVPWAMRDKQGELIGFEIDVAKRL 76
           TG + L     + AS   +LD + +   L V  +  + P+++    G   G ++ +A+ L
Sbjct: 4   TGCVTLLLMAASGASAQSHLDQVLQSNVLNVCTTGDYRPYSLLRANGRYEGIDVTMAQSL 63

Query: 77  AADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSG-VQLAA 135
           AA    Q+++VPT W  ++   L K  D+ +GG+SVT +R +S  F +     G + L  
Sbjct: 64  AASLNAQIKWVPTTWKTLMQDFLDKHCDIAVGGISVTLKRQQSAWFASSLGSDGKIPLVR 123

Query: 136 NKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNA 195
               A+ +  +E  N+ +V++    G       R   P+AS+  F D+   FQ+++N  A
Sbjct: 124 CADKAQ-YRTVEQLNRPSVRLIEPAGGTNEAFVRTVLPRASLTLFHDNVTIFQQLVNKKA 182

Query: 196 HAVIASSPKPEHESIKHSDSLFLPFSER-LSKGNEAFAVRLGEEDKKAFFDQWIADRTAD 254
             +I  + + +++  KH   L     +R +  G +A+ +   +   K + DQW+    A 
Sbjct: 183 DVMITDASEAQYQQ-KHYPQLCAVNPQRPMQYGEKAWMLPRDDMSWKLYVDQWLHLSLAS 241

Query: 255 GWLQARYEYWFST 267
           G  Q     W S+
Sbjct: 242 GEYQKVAGEWLSS 254