Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Enterobacter asburiae PDN3

 Score =  117 bits (292), Expect = 3e-31
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 5/259 (1%)

Query: 8   LGRFSVKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMS-TFVPWAMRDKQGELI 66
           LGR ++  ++   L    ++   A++   L+ +KERGTL VG+  T+ P++ +   G+L 
Sbjct: 6   LGRQALMGVMAVALVAGMSVKTFAAENL-LNKVKERGTLLVGLEGTYPPFSFQGDDGKLT 64

Query: 67  GFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPY 126
           GFE++ A+ LA   G +    PT WDG++ +L +K+ DV+I  ++++ ER K   F+ PY
Sbjct: 65  GFEVEFAEELAKHLGVKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPY 124

Query: 127 SHSGVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQA 186
           + SG+Q    K    G     D   +  K+    G    +  R+      +  +DDD   
Sbjct: 125 TVSGIQALVKKGNEGGIKTAADL--KGKKVGVGLGTNYEEWLRQNVQGVDIRTYDDDPTK 182

Query: 187 FQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKAFFDQ 246
           +Q++  G   A++        + +K +++      +  S+     AVR G ED     D 
Sbjct: 183 YQDLRVGRIDAILVDR-LAALDLVKKTNNTLAVAGDAFSRQESGVAVRKGNEDLVKAIDS 241

Query: 247 WIADRTADGWLQARYEYWF 265
            IAD   DG L+A  E WF
Sbjct: 242 AIADMQKDGSLKALSEKWF 260