Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., cystine ABC transporter substrate-binding protein from Escherichia coli ECRC62

 Score =  114 bits (285), Expect = 2e-30
 Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 5/259 (1%)

Query: 8   LGRFSVKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMS-TFVPWAMRDKQGELI 66
           LGR ++  ++   L    ++ + A D   L+ +KERGTL VG+  T+ P++ +   G+L 
Sbjct: 25  LGRQALMGVMAVALVAGMSVKSFA-DEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLT 83

Query: 67  GFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPY 126
           GFE++ A++LA   G +    PT WDG++ +L +K+ DV+I  ++++ ER K   F+ PY
Sbjct: 84  GFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPY 143

Query: 127 SHSGVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQA 186
           + SG+Q A  KK  EG T     + +  K+    G    +  R+      V  +DDD   
Sbjct: 144 TISGIQ-ALVKKGNEG-TIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTK 201

Query: 187 FQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKAFFDQ 246
           +Q++  G   A++        + +K ++       E  S+     A+R G ED     + 
Sbjct: 202 YQDLRVGRIDAILVDR-LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVND 260

Query: 247 WIADRTADGWLQARYEYWF 265
            IA+   DG LQA  E WF
Sbjct: 261 AIAEMQKDGTLQALSEKWF 279