Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 90.1 bits (222), Expect = 5e-23
 Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 39/281 (13%)

Query: 1   MQLFGQRLGRFSVKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMS-TFVPWAMR 59
           M+    +  R ++  L    + L F  P  AS    ++  K +G + +G+     PW   
Sbjct: 1   MKTTNMKFSRRALLALAAATVALPFVAPVDAS-AATVEEAKAKGKVVIGIQGDNSPWGFV 59

Query: 60  DKQGELIGFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKS 119
           +  G   G + D+ K  A   G +VEFVP A    IPALL  K DV+   M++T ER+KS
Sbjct: 60  NSSGVQDGLDADIGKAFADYLGVKVEFVPLAVANRIPALLTGKVDVLFATMAMTAERAKS 119

Query: 120 VLFTAPYSHS--GVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASV 177
           + ++ PY  +   V    +KK+A GF  L   N    K +A   A T         KA++
Sbjct: 120 IQYSKPYVGNVFSVYGPKDKKIA-GFDDLTSLNVGVPKSSAMDTAITAGAG----SKANI 174

Query: 178 LQFDDDAQAFQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNE-------- 229
           L+FDDDA   Q +I+G   AV                ++F  + +RL+K  E        
Sbjct: 175 LRFDDDAANIQALISGQVEAV--------------GGNMF--YGDRLNKAAEGKYESKFD 218

Query: 230 ------AFAVRLGEEDKKAFFDQWIADRTADGWLQARYEYW 264
                     R GE+D     + ++    +DG L   Y+ W
Sbjct: 219 LTTMYNGAGTRPGEKDWNETINAFLDKIKSDGQLAKIYDKW 259