Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  127 bits (318), Expect = 3e-34
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 14/213 (6%)

Query: 57  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 116
           W   L  G ++TL+L  I++I  L L +   + R SR     AL   YI   R TPLLVQ
Sbjct: 9   WLPKLAQGAILTLELVAIAVIAGLLLAIPLGIARSSRRWYVSALPYAYIFFFRGTPLLVQ 68

Query: 117 IYLLYFVFGPVIGL----------DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEA 166
           ++L+Y+       +          D F  A   + L   AY AE+ RG + +IP G+ EA
Sbjct: 69  LFLVYYGLAQFDSVRESFMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEA 128

Query: 167 ARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSE 226
           AR+LG+S+  T + +ILP+  +  LP  +NE++ ++K S++ S + + +LT   R I++ 
Sbjct: 129 ARALGMSKPKTLFYIILPRASRIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIAR 188

Query: 227 TAMPFEIWFSVAAIYLLLTLTL----SALSAWL 255
           T +P EI+F+    YLL+   L      L  WL
Sbjct: 189 TYLPVEIFFAAGLFYLLMAYVLVRGFKLLERWL 221