Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  129 bits (325), Expect = 5e-35
 Identities = 83/243 (34%), Positives = 128/243 (52%), Gaps = 25/243 (10%)

Query: 35  MGYTWQWHRVPEYVLIF----EDGEWWAG-DLLHGLLVTLQLTGISLIFTLALGLTTALL 89
           M Y+W W       LIF      GE   G  LL GLL T+ L+ ++    L LGL   + 
Sbjct: 1   MHYSWDW-------LIFFKPSVTGEGLYGLMLLRGLLWTVALSLLAWTLALGLGLIAGVS 53

Query: 90  RQSRSLVGRALGTGYIAVVRNTPLLVQIYLLYFVFGPVIGLD-------------RFATA 136
           R   +   R L T YI   RNTPLLVQ++L YFV   ++ L+             +F T 
Sbjct: 54  RTLPNRAARYLSTVYIHCFRNTPLLVQLFLWYFVVPELLPLEWGNALKQMNPTTNQFLTV 113

Query: 137 VLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTN 196
           ++ L L+  A  AE  R G+ S+P+ Q +AA +LGL     +  VILPQ L+  +PPLT+
Sbjct: 114 LVGLTLYTAAKAAEQVRAGIESVPRSQKQAAMALGLGTAAAYRHVILPQALRIVIPPLTS 173

Query: 197 EMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWLE 256
           + +++ KNS++   + + +LT Q R +   +A PFE + +   IY+++T  +  L   +E
Sbjct: 174 DFLNVFKNSAVALTIGLMELTGQTRQLSEFSAHPFEAFIAATLIYMVITYGVIVLMRHIE 233

Query: 257 HKL 259
            ++
Sbjct: 234 RRV 236