Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  179 bits (455), Expect = 5e-50
 Identities = 98/204 (48%), Positives = 131/204 (64%)

Query: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115
           W AG L  GL  TL ++ +S    L +GL   L R S +   R L T Y+ +VR TPLLV
Sbjct: 113 WAAGPLAWGLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLV 172

Query: 116 QIYLLYFVFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRF 175
           QI++ YF  G V+ L R    V ALALF GAY AE+ R G+ SI +GQ EAARSLGL+  
Sbjct: 173 QIFIFYFFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232

Query: 176 FTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWF 235
            +   VILPQ  +R LPPL  + +SL+K++S+VSV+AI +LT  GR  ++ +   FEIWF
Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292

Query: 236 SVAAIYLLLTLTLSALSAWLEHKL 259
            VA +YLL+ L LS +++ LE +L
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRL 316