Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 3e-35
 Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 14/213 (6%)

Query: 57  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 116
           W   L  G  +TL+L  I+++  L L +   + R SR    RA+   YI   R TPLLVQ
Sbjct: 9   WLPRLAEGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQ 68

Query: 117 IYLLYFVFGPVIGL----------DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEA 166
           ++L+Y+       +          D F   VL + L   AY AE+ RG L +IP+G+ EA
Sbjct: 69  LFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPKGEIEA 128

Query: 167 ARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSE 226
           AR+LG+SR  T + ++LP+  +  LP  +NE++ ++K S++ S + + +LT   R I++ 
Sbjct: 129 ARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIAR 188

Query: 227 TAMPFEIWFSVAAIYLLLTLTL----SALSAWL 255
           T +P EI+F+    YL+++  L      L  WL
Sbjct: 189 TYLPVEIFFAAGVFYLVISFMLVQGFKLLERWL 221