Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., ABC transmembrane type-1 domain-containing protein from Pseudomonas protegens RBAN4

 Score =  181 bits (460), Expect = 1e-50
 Identities = 98/204 (48%), Positives = 134/204 (65%)

Query: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115
           W AG LL GL  TL L+ +S +  L +GL T L R S +   R L T Y+ +VR TPLLV
Sbjct: 113 WAAGPLLWGLWTTLWLSVVSGVLGLLIGLGTGLCRLSSNPTLRDLSTIYVELVRGTPLLV 172

Query: 116 QIYLLYFVFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRF 175
           QI++ YF  G V+ L R    + AL+LF GAY AE+ R G+ SI +GQ EAARSLGLS  
Sbjct: 173 QIFIFYFFIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSIARGQNEAARSLGLSAG 232

Query: 176 FTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWF 235
            +   V+LPQ  +R LPPL  + +SL+K++S+VSV+AI +L   GR +++ +  PFEI F
Sbjct: 233 QSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILF 292

Query: 236 SVAAIYLLLTLTLSALSAWLEHKL 259
            VA +YLL+ L LS +++ LE +L
Sbjct: 293 CVAGLYLLINLPLSKMASRLERRL 316



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 18 MLVFAGLVWLLDSGAEAMGYTWQWHRVPEY 47
          +LV  GL   L      M Y W+W+RVP+Y
Sbjct: 16 VLVLIGLAGALYYATSLMSYEWRWNRVPQY 45