Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., Octopine transport system permease protein OccM from Pseudomonas lactucae CFBP13502

 Score =  129 bits (325), Expect = 4e-35
 Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 12/208 (5%)

Query: 62  LHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLY 121
           L GLL TL+L  ISL F L   L   L+R S+  +       Y  V+R TP+LVQ++L+Y
Sbjct: 16  LDGLLTTLKLLAISLFFGLLAALPLGLMRVSKQPIVNGAAWLYTYVIRGTPMLVQLFLIY 75

Query: 122 FVFG-----------PVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSL 170
           +              P++    F  A LA A+   AYTAE+  G L + P G+ EAA+++
Sbjct: 76  YGLAQFEAVRESFLWPLLSSATFC-ACLAFAINTSAYTAEIIAGSLKATPNGEIEAAKAM 134

Query: 171 GLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMP 230
           G+SR+  +  ++LP  L+R LP  +NE++ +++ +S+ S++ + D+T   R + ++  +P
Sbjct: 135 GMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQFYLP 194

Query: 231 FEIWFSVAAIYLLLTLTLSALSAWLEHK 258
           FE + +  A YL LT  L  L    E +
Sbjct: 195 FEAYITAGAFYLCLTFILVRLFKLAERR 222