Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Cystine ABC transporter, permease protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  133 bits (334), Expect = 4e-36
 Identities = 77/209 (36%), Positives = 123/209 (58%), Gaps = 5/209 (2%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL G + TLQL+   + F L LG   AL+R S     R L   YI++ R TPL+ Q++++
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 121 YF---VFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFT 177
           Y+    FG  I LD    A++ L+L   AYT+E  R  +++I +GQ+EAA S+G++ + T
Sbjct: 75  YYGLPQFG--IELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQT 132

Query: 178 FYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSV 237
               ILPQ  +  LPPL+N  +SL+K++S+ + + + +L  Q + I S T   F ++ + 
Sbjct: 133 LRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192

Query: 238 AAIYLLLTLTLSALSAWLEHKLGAQWRSP 266
           + IY ++   LSAL  + E++L  Q R P
Sbjct: 193 SLIYWVMATVLSALQNYFENQLNRQEREP 221