Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., cystine ABC transporter permease from Erwinia tracheiphila SCR3

 Score =  129 bits (323), Expect = 7e-35
 Identities = 75/205 (36%), Positives = 120/205 (58%), Gaps = 5/205 (2%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL G L TLQL+   + F L LG   A++R S           Y++V R TPL+ Q++++
Sbjct: 15  LLKGALFTLQLSVGGMFFGLLLGFMLAIMRLSSFRPLNWASRFYVSVFRGTPLIAQLFMI 74

Query: 121 YF---VFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFT 177
           Y+    FG  I LD   +A++ L+L   AYT+E  RG + +I +GQ+EAA S+G++R+ T
Sbjct: 75  YYGLPQFG--IELDPIPSAMIGLSLNTAAYTSESLRGAIAAIERGQWEAAASIGMTRWQT 132

Query: 178 FYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSV 237
              V+LPQ  +  LPPL N  +SL+K++S+ + + + +L  Q + I S T   F ++ ++
Sbjct: 133 LRRVVLPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAI 192

Query: 238 AAIYLLLTLTLSALSAWLEHKLGAQ 262
           + IY L+   LS L + LE  +  Q
Sbjct: 193 SVIYWLMATLLSVLQSRLESSVNRQ 217