Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  131 bits (330), Expect = 1e-35
 Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 3/202 (1%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL G  +TL ++ + L+  L +GL     R     +   +   +I V+R TP++VQ+  +
Sbjct: 15  LLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIRGTPIVVQVMFI 74

Query: 121 YFVFGPV---IGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFT 177
           YF        + +D F+ AV+ + +  GAY AE+ RG + SI +G  EA  +LGLSR  T
Sbjct: 75  YFALPMAFTDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRET 134

Query: 178 FYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSV 237
              VILP  L+R LPPL N+ +  IK++S+  V+ + +LT QG+ I++      EIW +V
Sbjct: 135 IRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAV 194

Query: 238 AAIYLLLTLTLSALSAWLEHKL 259
           A +YL++TL LS +   LE ++
Sbjct: 195 AVVYLIITLVLSFVLRRLERRM 216