Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  130 bits (327), Expect = 2e-35
 Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 5/195 (2%)

Query: 60  DLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYL 119
           +LL GL VT+QLT ++ +  LA+G+  A +R  R+     +   Y+ ++RNTP +VQ++ 
Sbjct: 16  ELLAGLWVTVQLTVMATVGGLAIGIFGAAIRSGRTTWFSRIWGAYVEIIRNTPFVVQLF- 74

Query: 120 LYFVFG-PVIGLDRFA--TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFF 176
            + VFG P +GL   A   A+LA+ +  GAY+ E+ R G+   P+GQ+EA R LGL+R  
Sbjct: 75  -FIVFGLPNLGLKMTAGEAALLAMVVNLGAYSTEIIRAGIQVTPKGQWEAGRVLGLTRLQ 133

Query: 177 TFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFS 236
           TF  V+LP  LQR  P L ++ + ++  SS+VS ++  +LT     I S T + FE++  
Sbjct: 134 TFIRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVYLV 193

Query: 237 VAAIYLLLTLTLSAL 251
              IYL L++TL  L
Sbjct: 194 TTGIYLALSITLRQL 208