Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  137 bits (345), Expect = 2e-37
 Identities = 80/209 (38%), Positives = 124/209 (59%), Gaps = 5/209 (2%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL G + TLQL+   + F L LG   AL+R S  L  R L   YI+V R TPL+ Q++++
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPVLPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 121 YF---VFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFT 177
           Y+    FG  I LD    A++ L+L   AYT+E  R  ++SI +GQ+EAA S+G++ + T
Sbjct: 75  YYGLPQFG--IELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQT 132

Query: 178 FYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSV 237
               ILPQ  +  LPPL+N  +SL+K++S+ + + + +L  Q + I S T   F ++ + 
Sbjct: 133 LRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192

Query: 238 AAIYLLLTLTLSALSAWLEHKLGAQWRSP 266
           + IY ++   LSAL  + E++L  Q R P
Sbjct: 193 SLIYWVMATVLSALQNYFENQLNRQERDP 221