Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  126 bits (316), Expect = 7e-34
 Identities = 71/202 (35%), Positives = 114/202 (56%), Gaps = 5/202 (2%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           +  G+  TL ++ IS+     L +  A+ R S +    A+ + Y +  R  PLL+QIYL+
Sbjct: 118 ITQGVATTLYISAISIAIAFVLAMVGAIARLSNNGFAIAISSFYTSFFRGVPLLIQIYLI 177

Query: 121 YF---VFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFT 177
           Y      G VIG       V AL+L  GAY  E+FR G+ SIP+GQ+EAAR+LG     T
Sbjct: 178 YLGIPQLGYVIGA--IPAGVAALSLCYGAYMTEIFRAGIMSIPKGQWEAARALGFGPMHT 235

Query: 178 FYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSV 237
              ++LPQ L+  +PP  N+ ++++K+SS+VSV+ +++L    R    +     E+  + 
Sbjct: 236 LVLIVLPQSLRLIIPPTGNQFIAMLKDSSLVSVIGVWELMFLARTQGRDEFRHLEMLITA 295

Query: 238 AAIYLLLTLTLSALSAWLEHKL 259
           A +Y L+++ L  + A LE +L
Sbjct: 296 AGLYWLISIVLEQVQARLERRL 317