Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  134 bits (338), Expect = 1e-36
 Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 11/216 (5%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL  +  TL L  ISL+    + +  AL+R S++ +  +L  GY+ ++R+TPLLVQ++L+
Sbjct: 13  LLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMFLI 72

Query: 121 YFVFGPVIGL-----------DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARS 169
           Y+      G+           + +  A+LALAL   AYT+E+ RGG+ S+  GQ EAAR+
Sbjct: 73  YYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLGQIEAARA 132

Query: 170 LGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAM 229
           +G+S F  F  ++ P  +++ LP   NE++ +IK++S+ S + I ++T   + I+S T  
Sbjct: 133 VGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISATYS 192

Query: 230 PFEIWFSVAAIYLLLTLTLSALSAWLEHKLGAQWRS 265
           P E++    AIYL +T  +S L    E  L    R+
Sbjct: 193 PVEVFIVAGAIYLFITFVVSRLVMLAEWWLNPHMRA 228