Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  123 bits (309), Expect = 3e-33
 Identities = 76/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           +L GL VTL+         L LGL  ALLR+SR  +        +  +R+TPLLVQ++ L
Sbjct: 23  ILIGLTVTLKAAAAGFAIALVLGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLVQLFFL 82

Query: 121 YFVFGPVIG--LDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTF 178
           Y+V  P  G  L  F T  LAL L   AYT+EV+RGG+ ++  GQ+EAA +L L+R  T+
Sbjct: 83  YYVL-PEFGIVLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATALNLTRMQTY 141

Query: 179 YDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFS-V 237
            D+I+PQ + R +P + N +V++IK + ++SV+ + ++     N++ E    + +  + V
Sbjct: 142 RDIIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLA-NMIGERTFEYLVPLTLV 200

Query: 238 AAIYLLLTLTLSALSAWLEHKL 259
             I+LLLT+  SA  + L+  L
Sbjct: 201 GLIFLLLTIICSAGLSRLQRAL 222