Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  138 bits (348), Expect = 1e-37
 Identities = 87/253 (34%), Positives = 132/253 (52%), Gaps = 29/253 (11%)

Query: 18  MLVFAGLVWLLDSGAEAMGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLI 77
           +L+ AGL++ +  G       W W +   Y   + DG          L+ T+ L G S+I
Sbjct: 36  LLLAAGLIFAMIEG-------WDWDKFQRYGPRYIDG----------LITTITLVGSSII 78

Query: 78  FTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLYFVFG---PVIGL---- 130
               L +  A  R S + +  A    Y+ V R+TPLL Q++L+Y+  G   P +      
Sbjct: 79  LGAILSVPIAFARMSENRIIGAFAYAYVYVFRSTPLLAQLFLIYYGLGSFRPALEAVDLW 138

Query: 131 ----DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQL 186
               + +   +L+L L   AY AE+ RG + S+P+GQ+E A SLG+S+F TF  VILPQ 
Sbjct: 139 WFFREAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQHEGAASLGISKFITFRKVILPQA 198

Query: 187 LQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTL 246
           L   L P  NE++ +IK S++VS++ +FDL  Q R   S T   ++ +   A  YL +  
Sbjct: 199 LIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRT-FDYQAYLWAAIFYLTIVE 257

Query: 247 TLSALSAWLEHKL 259
           TL  + AWLE +L
Sbjct: 258 TLRHIWAWLEARL 270