Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., glutamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  269 bits (687), Expect = 4e-77
 Identities = 138/239 (57%), Positives = 174/239 (72%), Gaps = 5/239 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +++   ++KWYG FQ L +I LTV++GE +V+CGPSGSGKSTLIR ++ LE  DSG I  
Sbjct: 1   MVQISGLNKWYGNFQVLHAIDLTVSQGERIVLCGPSGSGKSTLIRCISRLEVADSGVIRA 60

Query: 63  LPE-----LDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHF 117
           L          R +   +IGMVFQ+FNLFPH+TVL+N TLAP+     S + A+  A HF
Sbjct: 61  LDADLGKPSPARHKALREIGMVFQNFNLFPHMTVLQNCTLAPMSVRGFSRKRAEAHARHF 120

Query: 118 LQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVMV 177
           L +V I +Q +KYP QLSGGQQQRVAIAR+LCM+P+I+LFDEPTSALDPE + EVL+V+V
Sbjct: 121 LDKVGIENQANKYPSQLSGGQQQRVAIARALCMEPKIMLFDEPTSALDPEMVKEVLDVIV 180

Query: 178 DLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQI 236
            LA  G+TM+CVTHEMGFAR+VA RV+F+D G I+E   PEQ F  P   R Q FL QI
Sbjct: 181 TLADTGMTMLCVTHEMGFARQVAERVLFLDAGRIVEDLPPEQFFTAPKSDRAQAFLAQI 239