Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., arginine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  249 bits (635), Expect = 5e-71
 Identities = 127/249 (51%), Positives = 178/249 (71%), Gaps = 15/249 (6%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +++   ++K+Y Q+ AL+ I++ V +GE++ I GPSGSGKSTL+R VN LE ID G + V
Sbjct: 4   IVKAVNLNKYYDQYHALRDINIEVEQGEVMCIIGPSGSGKSTLLRCVNQLEKIDKGGLWV 63

Query: 63  -------------LPELDER--TRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSA 107
                        L E++E    R+    GMVFQ FNLFPH+TVL+N+   P + LK S 
Sbjct: 64  DGELVGYRVVGNKLHEMNESQIARQRLATGMVFQRFNLFPHMTVLQNIIEGPCQVLKRSP 123

Query: 108 QEAKERAYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPE 167
           +EA E A   L RV + D+ + YP++LSGGQQQRVAIAR+L M+P+++LFDEPTSALDPE
Sbjct: 124 KEAIEDALELLARVGLADKRNAYPVELSGGQQQRVAIARALAMRPKLMLFDEPTSALDPE 183

Query: 168 TINEVLEVMVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHP 227
            + EVL VM DLA  G+TM+ VTHE+GFAR+V++R++FMD G+I+E GSPE++  +P +P
Sbjct: 184 LVGEVLSVMRDLATTGMTMIVVTHELGFAREVSNRMVFMDAGQIVEAGSPEEILISPQNP 243

Query: 228 RTQQFLNQI 236
           RTQ F++ +
Sbjct: 244 RTQSFISAV 252