Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., arginine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  251 bits (640), Expect = 1e-71
 Identities = 133/251 (52%), Positives = 173/251 (68%), Gaps = 16/251 (6%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +IE   + K +G  Q LK ISL V +GE+VV+ G SGSGK+T IR +N LE I  G I V
Sbjct: 9   IIEALDIHKSFGALQILKGISLQVRRGEVVVLIGASGSGKTTFIRCINLLEDIQGGRIRV 68

Query: 63  --------------LPELDERT--RRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLS 106
                         L    ER   R+   IGMVFQ FNLFPH+T LEN+  API+ L   
Sbjct: 69  NGRAMGYRERSDGSLVRDSERNIARQRRDIGMVFQRFNLFPHMTALENIIEAPIQVLGTP 128

Query: 107 AQEAKERAYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDP 166
             +A E+A   L RV + D+   YP  LSGGQQQRVAIAR+L M+P+ +LFDEPTSALDP
Sbjct: 129 RAQALEQARGLLARVGLADKASHYPAMLSGGQQQRVAIARALAMKPQAMLFDEPTSALDP 188

Query: 167 ETINEVLEVMVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTH 226
           ET+ EVL+VM +LA++G+TM+ VTHEMGFAR+VA RV+ +D+GE++E G PEQ+F +P+H
Sbjct: 189 ETVGEVLQVMKELAEEGMTMVVVTHEMGFAREVADRVVVLDQGELIEQGPPEQIFSHPSH 248

Query: 227 PRTQQFLNQIL 237
           PRT+ FL+++L
Sbjct: 249 PRTRAFLSRVL 259