Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., amino acid ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  267 bits (683), Expect = 1e-76
 Identities = 139/250 (55%), Positives = 173/250 (69%), Gaps = 19/250 (7%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +I    ++KWYG FQ L   S  V KGE++V+CGPSGSGKSTLI+ VN LE    G+I+V
Sbjct: 1   MISIKNINKWYGDFQVLTDCSTDVKKGEVIVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 60

Query: 63  -----------LPELDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAK 111
                      LP+L  R      +GMVFQHF LFPHLT+ ENLT+A I+ L  S +EA 
Sbjct: 61  DGTSIADPKTNLPQLRSR------VGMVFQHFELFPHLTITENLTIAQIKVLGRSKEEAT 114

Query: 112 ERAYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINE 171
           ++    L+RV ++   HK+P QLSGGQQQRVAIAR+L M P ++LFDEPTSALDPE +NE
Sbjct: 115 KKGLQLLERVGLSAHAHKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDPEMVNE 174

Query: 172 VLEVMVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQ--NPTHPRT 229
           VL+VMV LAQ+G+TMMCVTHEMGFARKVA RV+FMD G+I+E    E+ F   +    R 
Sbjct: 175 VLDVMVQLAQEGMTMMCVTHEMGFARKVADRVIFMDAGKIIEDCPKEEFFGDISARSERA 234

Query: 230 QQFLNQILSH 239
           Q FL +IL H
Sbjct: 235 QHFLEKILQH 244