Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  281 bits (720), Expect = 6e-81
 Identities = 148/241 (61%), Positives = 178/241 (73%), Gaps = 6/241 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           ++    V+KWYG F  L++I+L V KGE +VICGPSGSGKST+IR +N LE   SG I V
Sbjct: 5   IVSLQNVNKWYGDFHVLRNINLEVAKGERIVICGPSGSGKSTMIRCINRLEEHQSGVIQV 64

Query: 63  L-PELDERTRR----SGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHF 117
              EL    RR      ++GMVFQHFNLFPHLTVLENL L P   LK    +A+  A  +
Sbjct: 65  DGTELINDLRRIEAIRREVGMVFQHFNLFPHLTVLENLVLGPTWVLKQPLAQAEALAMKY 124

Query: 118 LQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVMV 177
           L+RV+I DQ HKYP QLSGGQQQRVAIARSLCM P+I+LFDEPTSALDPE + EVL+VMV
Sbjct: 125 LERVRIPDQAHKYPGQLSGGQQQRVAIARSLCMTPKIMLFDEPTSALDPEMVKEVLDVMV 184

Query: 178 DLA-QDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQI 236
            LA +  +TM+CVTHEMGFARKVA RV+FMD GEI+E G P+Q F NP   R +QFL+Q+
Sbjct: 185 SLALESRMTMLCVTHEMGFARKVADRVIFMDHGEIVEQGKPDQFFGNPQTDRARQFLSQV 244

Query: 237 L 237
           +
Sbjct: 245 V 245