Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  271 bits (693), Expect = 9e-78
 Identities = 137/244 (56%), Positives = 173/244 (70%), Gaps = 7/244 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +I F  ++KWYG +QAL  I+  V KGE+VV+CGPSGSGKSTLIRTVN LE + SG+++ 
Sbjct: 20  MILFSDINKWYGDYQALADINAEVKKGEVVVVCGPSGSGKSTLIRTVNRLEEVKSGQLLF 79

Query: 63  ------LPELDERTRR-SGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAY 115
                  P       R   +IG VFQ FNLFPHL+VLEN+ L+P+R L +   +AK +A 
Sbjct: 80  DGHDIHAPMGSAALNRLRSRIGFVFQSFNLFPHLSVLENIMLSPMRVLGVKRADAKTKAG 139

Query: 116 HFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEV 175
             L+RV ++ +   YP QLSGGQQQRVAIAR+L M+P  +LFDEPTSALDPE + EVL V
Sbjct: 140 QLLERVGLSSKAGAYPAQLSGGQQQRVAIARALAMEPPAMLFDEPTSALDPEMVGEVLSV 199

Query: 176 MVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQ 235
           M  LA DG+TMMCVTHEM FAR+VA R+ FMD G ILE   PE  F++P HPR Q+FL+ 
Sbjct: 200 MRGLAHDGMTMMCVTHEMNFAREVADRIWFMDAGRILEKADPETFFRSPQHPRAQRFLSD 259

Query: 236 ILSH 239
           + +H
Sbjct: 260 LRAH 263