Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  285 bits (729), Expect = 6e-82
 Identities = 145/240 (60%), Positives = 179/240 (74%), Gaps = 5/240 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           VI    V KWYG FQ L+ I L V +GE +VICGPSGSGKSTL+R +N LE    G+I+V
Sbjct: 20  VIRMVGVQKWYGDFQVLRDIDLEVQRGERIVICGPSGSGKSTLLRCINRLEEHQQGQIVV 79

Query: 63  -LPELDERTRRSGKI----GMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHF 117
              EL    RR   +    GMVFQHFNLFPHLT+LEN TLAP+ + K S +EAKE A  +
Sbjct: 80  NRAELTADMRRIDAVRRDVGMVFQHFNLFPHLTILENCTLAPVWSKKYSPKEAKEVAMSY 139

Query: 118 LQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVMV 177
           L+RV+I +Q +KYP QLSGGQQQRVAIAR+LCM P+++LFDEPTSALDPE + EVL+ MV
Sbjct: 140 LERVRIPEQANKYPSQLSGGQQQRVAIARALCMGPKVMLFDEPTSALDPEMVKEVLDTMV 199

Query: 178 DLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQIL 237
            LA DG+TM+ VTHEM FAR+VA+RV+FMD G I+E   P++ F NP H RT+ FL+Q+L
Sbjct: 200 SLADDGMTMLSVTHEMNFARQVANRVIFMDRGAIVEQAPPQEFFGNPKHERTRLFLSQLL 259