Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., L-aspartate ABC transporter ATP-binding protein / L-glutamate ABC transporter ATP-binding protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  274 bits (701), Expect = 1e-78
 Identities = 143/250 (57%), Positives = 180/250 (72%), Gaps = 19/250 (7%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +I    V+KWYG FQ L   S  V+KGE+VV+CGPSGSGKSTLI+ VN LE    GEI+V
Sbjct: 1   MISIKNVNKWYGDFQVLTDCSTEVSKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGEIVV 60

Query: 63  -----------LPELDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAK 111
                      LP+L  R      +GMVFQHF LFPHL+++ENLT+A I+ L  S  EA 
Sbjct: 61  DGTSISDSKTNLPKLRSR------VGMVFQHFELFPHLSIVENLTIAQIKVLGRSKAEAT 114

Query: 112 ERAYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINE 171
           E+    L+RV +++  HK+P QLSGGQQQRVAIAR+L M P ++LFDEPTSALDPE +NE
Sbjct: 115 EKGLKLLERVGLSEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNE 174

Query: 172 VLEVMVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPT--HPRT 229
           VL+VMV LAQ+G+TMMCVTHEMGFARKVA+RV+FMD+G+I+E  + E+ F + +    R 
Sbjct: 175 VLDVMVQLAQEGMTMMCVTHEMGFARKVANRVIFMDKGQIVEDCAKEEFFGDVSARSERA 234

Query: 230 QQFLNQILSH 239
           QQFL +IL H
Sbjct: 235 QQFLAKILQH 244