Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  257 bits (657), Expect = 1e-73
 Identities = 135/240 (56%), Positives = 170/240 (70%), Gaps = 5/240 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +I    ++K YG F  L+ I L V +GE +V+CGPSGSGKSTLIR +N LE    G I V
Sbjct: 20  LIRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKSTLIRCINRLEVAQQGSIQV 79

Query: 63  LP-ELDERTRRSGK----IGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHF 117
              +L   TR + +    IGMVFQHFNLFPH++VL+N  LAP     LS ++A+ERA  +
Sbjct: 80  DGIDLAATTREAAQVRSDIGMVFQHFNLFPHMSVLDNCLLAPTSVRGLSRKDAEERARMY 139

Query: 118 LQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVMV 177
           L +V I  Q HKYP QLSGGQQQRVAIAR+LCM+P I+LFDEPTSALDPE + EVL+V+V
Sbjct: 140 LSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIMLFDEPTSALDPEMVAEVLDVLV 199

Query: 178 DLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQIL 237
            LA  G+TM+CVTHEMGFAR+VA RV+F++ G+I+E   P+  F  P   R + FL QIL
Sbjct: 200 QLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSPPQVFFNQPRTERAKAFLAQIL 259