Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., glutamine ABC transporter ATP-binding protein GlnQ from Escherichia coli ECRC62

 Score =  248 bits (634), Expect = 6e-71
 Identities = 129/240 (53%), Positives = 173/240 (72%), Gaps = 7/240 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           VIEF  VSK +G  Q L +I L + +GE+VVI GPSGSGKSTL+R +N LE I SG++IV
Sbjct: 1   VIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60

Query: 63  L------PELDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYH 116
                  P++DER  R  + GMVFQ F LFPHLT LEN+   P+R    + +EA++ A  
Sbjct: 61  DGLKVNDPKVDERLIRQ-EAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLARE 119

Query: 117 FLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVM 176
            L +V + ++ H YP +LSGGQQQRVAIAR+L ++P+++LFDEPTSALDPE  +EVL+VM
Sbjct: 120 LLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVM 179

Query: 177 VDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQI 236
            DLA++G+TM+ VTHE+GFA KVA R++F+D+G I E G P+ L +NP   R Q+FL  +
Sbjct: 180 QDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNPPSQRLQEFLQHV 239