Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., amino acid ABC transporter ATPase/permease from Agrobacterium fabrum C58

 Score =  286 bits (731), Expect = 3e-82
 Identities = 141/242 (58%), Positives = 180/242 (74%), Gaps = 5/242 (2%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +I    V KWYG F ALK +++TV KGE +V+CGPSGSGKSTLIR +N LE I  G+I V
Sbjct: 11  LIALEGVGKWYGAFHALKGVNMTVRKGEKIVLCGPSGSGKSTLIRCINHLEEIQEGKITV 70

Query: 63  LPELDERTRRS-----GKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHF 117
                  + R+      ++GMVFQ FNLFPH T++EN TLAP+R   LS  +A+  A  +
Sbjct: 71  EGTTLSDSSRAIDAVRREVGMVFQSFNLFPHKTIMENCTLAPMRVKGLSKADAEATARKY 130

Query: 118 LQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVMV 177
           L RV+I +Q  KYP QLSGGQQQR AIAR+LCM+P+ +LFDEPTSALDPE + EVL+ M+
Sbjct: 131 LDRVRILNQADKYPAQLSGGQQQRAAIARALCMEPKAMLFDEPTSALDPEMVKEVLDTMI 190

Query: 178 DLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQIL 237
            LA+DG+TM+CVTHEMGFAR+VA RV+FM EGEI+E G PE+ F++P H RT+ FL +IL
Sbjct: 191 GLARDGMTMICVTHEMGFARQVADRVVFMSEGEIIEEGPPEEFFRDPKHQRTRTFLGEIL 250

Query: 238 SH 239
           +H
Sbjct: 251 AH 252