Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., amino acid ABC transporter ATPase/permease from Agrobacterium fabrum C58

 Score =  266 bits (680), Expect = 3e-76
 Identities = 142/244 (58%), Positives = 176/244 (72%), Gaps = 8/244 (3%)

Query: 3   VIEFHQVSKWYG-QFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEII 61
           +IE   V+KWYG  FQ L + SL V KGE+VVICGPSGSGKSTLI+ VN LE+I +G I 
Sbjct: 1   MIELQSVNKWYGPHFQVLTNCSLNVAKGEVVVICGPSGSGKSTLIKCVNALETIGNGVIT 60

Query: 62  VL------PELDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAY 115
           V       P+ D    RS ++GMVFQHF LFPH+T+LENL +   + L  +  EA  +A 
Sbjct: 61  VNGVEVTNPKTDMPKLRS-RVGMVFQHFELFPHMTILENLCIGQEKVLGRTPAEALAKAN 119

Query: 116 HFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEV 175
             L+RV +T    KYP QLSGGQQQRVAIAR+L M P  +LFDEPTSALDPE INEVL+V
Sbjct: 120 ALLERVGLTAHARKYPGQLSGGQQQRVAIARALAMDPVAMLFDEPTSALDPEMINEVLDV 179

Query: 176 MVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQ 235
           MV LAQ+G+TMM VTHEMGFARKVA R++FMD G+I+E+G  +  F +P   R + FL++
Sbjct: 180 MVSLAQEGMTMMVVTHEMGFARKVADRIVFMDGGKIVEIGEGDSFFTDPKTERARSFLSK 239

Query: 236 ILSH 239
           IL+H
Sbjct: 240 ILAH 243