Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  228 bits (582), Expect = 6e-64
 Identities = 136/349 (38%), Positives = 207/349 (59%), Gaps = 2/349 (0%)

Query: 311 MAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSI 370
           + ++ I   V  ++G+  AR +++ +  +N ++A    GD+TRR+      E GA++   
Sbjct: 366 LLIAGIGLLVIWLVGHGIARPLKQMVAMLN-DIA-QGEGDLTRRLTSDRADELGAIANGF 423

Query: 371 DILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSA 430
           +    K   +++Q+ +  + + + +  +A+I+ R    V +Q  + DQVA A+ E+  +A
Sbjct: 424 NTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATA 483

Query: 431 TEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIG 490
            +VAR+   A      AD  A QG + V  T      LA ++  AV +   L + S NI 
Sbjct: 484 QDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENIN 543

Query: 491 SILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIE 550
           +IL  IRGIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA +TQ +TEEIQ MI+
Sbjct: 544 AILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQ 603

Query: 551 NLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIV 610
            LQ+ ++ VV VM  SQ +T   V+   +   AL++I   +  I +M  Q+A AA+EQ  
Sbjct: 604 QLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSA 663

Query: 611 VSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           V++ +  +V  I +VA+E    A ES+++S  L  LA +Q++LI  FKV
Sbjct: 664 VAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712