Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  242 bits (618), Expect = 3e-68
 Identities = 157/451 (34%), Positives = 253/451 (56%), Gaps = 18/451 (3%)

Query: 224 VPDDVKARYIANLNRLQELALGQNGLLATMRKAQQ-----LENAL-----LIQNQQV-DA 272
           V  + +AR  A   ++++   G   L AT   +QQ     LE AL      +QN +  +A
Sbjct: 192 VSPETEARAAA---QIEKAIAGLKDLNATFGASQQSALTALETALGAYRSAVQNYKAANA 248

Query: 273 SLASSLAKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTA--- 329
           ++ ++ A++        +I+ +   +      + +    ++  IS  +AL++G   A   
Sbjct: 249 NIVTARAEMTTQGADIVTISDKLYEIQLTRRDAESAQARSLQLISTLLALLVGVIAALVI 308

Query: 330 -RSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGS 388
            R I +P+Q+    +  +A GD++  I    R E G L + I  +     EL+S I  G 
Sbjct: 309 TRQITRPIQETLAVVERIASGDLSHNIQVTRRDELGVLQQGIQRMGTTLRELISGIRDGV 368

Query: 389 RHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRAD 448
             + + A   + ++E+  A V  QK +TDQVA A+ E+  +  EVAR+ + A      AD
Sbjct: 369 TQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQEVARNAEQASLAAADAD 428

Query: 449 AEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLAL 508
            +A+ G + VA      E+LA+++  +      L + SN IGS++DVI+ +AEQTNLLAL
Sbjct: 429 GQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSVMDVIKAVAEQTNLLAL 488

Query: 509 NAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQE 568
           NAAIEAARAG+AGRGFAVVADEVR LA RTQ STEEI+ ++  LQ  ++QV  VM  S+ 
Sbjct: 489 NAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNSRS 548

Query: 569 QTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHE 628
            T + VE TR+   +L++I   +  I+ M  Q+A AA++Q  V++ ++  +  + +V+ +
Sbjct: 549 LTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIVNVRDVSEQ 608

Query: 629 TEREARESASSSEVLADLAAKQQQLIAHFKV 659
           T   + E+A SS  LA L ++ QQ+++HF+V
Sbjct: 609 TATASDETAKSSVELARLGSQLQQMVSHFRV 639