Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  219 bits (559), Expect = 3e-61
 Identities = 137/362 (37%), Positives = 202/362 (55%), Gaps = 2/362 (0%)

Query: 300 DAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGD--MTRRINY 357
           D A ++     + V A +A + L++ + TA  + +P+  +   L  +A GD  +T+R+ Y
Sbjct: 351 DKAQAAGTLKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAY 410

Query: 358 PTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTD 417
             + E G L+   +   DK    ++QI          A +S+ I+ +    +Q Q  + D
Sbjct: 411 AKKDELGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREID 470

Query: 418 QVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVG 477
           QVA A  E+  +A +VA S   A      AD  A++G   +  + R    LA ++  AVG
Sbjct: 471 QVATASNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVG 530

Query: 478 ITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATR 537
               L   S  IGS+L+VIR IAEQTNLLALNAAIEAARAG++GRGFAVVADEVR LA R
Sbjct: 531 EVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKR 590

Query: 538 TQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEM 597
           TQ S EEI+ +IE +Q  ++ VV  M  SQ Q ++   Q  +   AL  I+D +  I +M
Sbjct: 591 TQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDM 650

Query: 598 ADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHF 657
             Q+A AA++Q  V++ V  +V+ I  V      +A ESA+ S  L  LA++Q +L+  F
Sbjct: 651 NLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQF 710

Query: 658 KV 659
           +V
Sbjct: 711 RV 712