Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  198 bits (504), Expect = 5e-55
 Identities = 127/365 (34%), Positives = 196/365 (53%), Gaps = 7/365 (1%)

Query: 297 MLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMA--RGDMTRR 354
           ML++   S+     +AV  I A + ++I     R + +PL  +   +  +A   GD+TRR
Sbjct: 270 MLSEFRTSAVIATFIAVVIIIALLGMLI-----RILMQPLHLMTRAMQDIADGEGDLTRR 324

Query: 355 INYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKS 414
           +      EFG L  + +   ++    + ++++ + H+   A R    S  +M    EQ +
Sbjct: 325 LTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEHVNEVALRVVSASNSSMVNSDEQAN 384

Query: 415 QTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMES 474
           +T+ VAAAI +L  +A E+AR+   A  +   A   A+ G+Q V    +   QL+S + +
Sbjct: 385 RTNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMISA 444

Query: 475 AVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRAL 534
           +      L   + NIG IL+VI  I++QTNLLALNAAIEAARAG+AGRGFAVVADEVR L
Sbjct: 445 SSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 504

Query: 535 ATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAI 594
           A RTQ S +++Q MIE LQ  +++ V  MG SQ  +   V+        L S+  R+G I
Sbjct: 505 AHRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGEI 564

Query: 595 KEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLI 654
             M   VA A +EQ  V +S+   +T I  +  E     + +  +   L   AA+ +QL+
Sbjct: 565 DGMNQSVATATEEQTSVVESINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLV 624

Query: 655 AHFKV 659
             F++
Sbjct: 625 GSFRI 629