Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  235 bits (600), Expect = 4e-66
 Identities = 159/509 (31%), Positives = 266/509 (52%), Gaps = 15/509 (2%)

Query: 165 LQQSSGQRSMRNKAELITSGIARDLKNIRRADAKTDLNELEKVLSKDIEMARKRLDRVLV 224
           L++   +  + + A+   + ++   K++ + D+ T  N +   LSK I+ AR ++     
Sbjct: 131 LKREGARSKLGDTADNAVAKVSEVEKSLLQGDSVTQFNSVVD-LSKLIQQARFQVRGYTY 189

Query: 225 PDDVKARY---------IANLNRLQ-ELALGQNGLLATMRKAQQLENALLIQNQQVDASL 274
              V+A           +  +  LQ +L       L     + Q   A + Q +    + 
Sbjct: 190 SAKVEAEQPALDAIDNAVKKITELQGQLPAQYQANLEEASTSLQAYRAAVSQYRDSQTAA 249

Query: 275 ASSL----AKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTAR 330
           A++L    A+ D +  ++  +     ++ DA  + A   ++  + ++    LV  +   R
Sbjct: 250 AAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQLLLLATVLALIFGLVAAWAITR 309

Query: 331 SIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRH 390
            I  PL +       +A GD++  +    + E G L R++  +     EL+  I+ G   
Sbjct: 310 QIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQSMTVGLRELIGGISDGVTQ 369

Query: 391 LVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAE 450
           + + A + + ++E+  A V  QK +TDQVA A+ E+  +  EVAR+ + A +    AD +
Sbjct: 370 IASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVARNAEEASEAAVAADQQ 429

Query: 451 AKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNA 510
           A++G + V       E+LA+++ ++      L   S+ IGS+LDVI+ +A+QTNLLALNA
Sbjct: 430 AREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLDVIKSVAQQTNLLALNA 489

Query: 511 AIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQT 570
           AIEAARAG+AGRGFAVVADEVR+LA RTQ STEEI+ +I  LQ  ++QV  +M  S+  T
Sbjct: 490 AIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQSGTQQVATIMDNSRGLT 549

Query: 571 RACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETE 630
            + VE  R   SAL SI   +  I+ M  Q+A AA++Q  V++ +   V  + +V+ +T 
Sbjct: 550 DSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRDVSEQTA 609

Query: 631 REARESASSSEVLADLAAKQQQLIAHFKV 659
             + E+A+SS  LA L    Q L+  F+V
Sbjct: 610 AASEETAASSTELARLGTHLQALVGRFRV 638