Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  222 bits (565), Expect = 4e-62
 Identities = 136/352 (38%), Positives = 202/352 (57%), Gaps = 2/352 (0%)

Query: 310 IMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMA--RGDMTRRINYPTRCEFGALS 367
           I+ V+ +   V   +G   A +I +PL  +   L  +A   GD+TRR+   ++ E G L+
Sbjct: 208 ILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLA 267

Query: 368 RSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELE 427
            + +   DK   L+ QI   +  L    S+ ++ ++R+   ++ Q+ +TDQVA AI ++ 
Sbjct: 268 GAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMS 327

Query: 428 VSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSN 487
            +A EVARS  GA     + DAE +  ++ V  +      L +D+ S+      L +  +
Sbjct: 328 SAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQDVS 387

Query: 488 NIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQH 547
           +I S+L VIR IAEQTNLLALNAAIEAARAG+AGRGFAVVADEVRALA+RTQTST+EIQ 
Sbjct: 388 SIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQEIQG 447

Query: 548 MIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQE 607
           MI+ LQ  ++  VE M RS +       Q  E  ++L ++A  +G I  M  Q+A AA+E
Sbjct: 448 MIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASAAEE 507

Query: 608 QIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           Q  V++ +   V  IA        E +  A +S  LA+L  +  QL+  F++
Sbjct: 508 QTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559