Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  238 bits (606), Expect = 9e-67
 Identities = 149/381 (39%), Positives = 215/381 (56%), Gaps = 2/381 (0%)

Query: 281 LDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKIN 340
           LD   K     A+  +   DA  +      + +  ++A V L++ +  ARS+ +P+  + 
Sbjct: 335 LDVPEKVLVGPAEALKAQMDAENTRGTLLELGLGLLAAVVGLILVWLMARSVTRPILGVA 394

Query: 341 HELAYMA--RGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRS 398
           H L  +A   GD+TRR+ Y  + E G L+   +   DK   +++++    +     A +S
Sbjct: 395 HMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQS 454

Query: 399 AEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKV 458
           A I+ +  A +++Q  Q DQVA A  E+  +A +VARS   A      AD   + G   +
Sbjct: 455 AAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATRDGLTVI 514

Query: 459 ATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAG 518
             T      LASDM +A+     L   S  IGS+L+VIRGIAEQTNLLALNAAIEAARAG
Sbjct: 515 EHTTHNIGALASDMSTAMTQVEGLAANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAG 574

Query: 519 DAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTR 578
           +AGRGFAVVADEVR LA RTQ S EE + +IE+LQ  ++ VV  MG S  Q +  VEQ  
Sbjct: 575 EAGRGFAVVADEVRNLAQRTQESVEETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVG 634

Query: 579 EMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESAS 638
           +  +AL+ I D +  I +M  Q+A AA+EQ  V++ + ++V  I +V      +A ESA 
Sbjct: 635 QAVTALRQIGDAVTVISDMNLQIASAAEEQSAVAEEINNNVATIRDVTESLSEQANESAR 694

Query: 639 SSEVLADLAAKQQQLIAHFKV 659
            S+ L  LA +QQ L+  F+V
Sbjct: 695 VSQALNSLANQQQGLMDQFRV 715