Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 5e-62
 Identities = 188/681 (27%), Positives = 325/681 (47%), Gaps = 69/681 (10%)

Query: 3   LSIVQRIIAGFVLMLLLLILLGVISTLKIRGI---NDGLSEV-----------SDRATPL 48
           +S+  ++  GF ++LLL +   +     + G    +  LSE+           ++R T  
Sbjct: 12  ISVAAKLALGFAVVLLLTLATTISGWRALDGAIVRSQQLSEIGLINDLTKDLRAERITYR 71

Query: 49  VM----AVAGLKEALQESNRWVLEFRTSEEAGELPQLSNKFKDQQARFRQLSQQMNALTD 104
           V+    + A +   L + N  +   +      E  QL     ++ A  ++L    + L  
Sbjct: 72  VLNDDASKARISNILDQLNSMLTTLQQRSNVDESRQL---LTEKMALLQRLRDNFSELQR 128

Query: 105 STESQKQFQDVLQATNQFYSQA-DQVLTQHSEWVNALAQRRKLEIAFIRLEDTYQWAADL 163
           S  S+   ++ LQ+     S+A DQ+ TQ                A +++ D  Q +  L
Sbjct: 129 SVASRVALREALQSQEHALSEAIDQLQTQ----------------ALLKMPDDSQQSGVL 172

Query: 164 -LLQQSSGQRSMRNKAELITSGIARDLKNIRRADAKTDLNELEKVLSKDIE-MARKRLDR 221
            L+   S      N+  L+ +     +++  +      LN  +  L++ +E +A   L R
Sbjct: 173 GLMDTLSRHVEGANQQSLVPAYTFVPVEDFAKVGDNA-LNAADSSLAQLLEGLAPLGLPR 231

Query: 222 VLV--PDDVKARYIANLNRLQELALGQNGLLATMRKAQQLENALLIQNQQV-DASLASSL 278
            +   P    ++Y  +L++ +  A+          + +QL+N + I   ++   SL    
Sbjct: 232 AISEQPGVELSKYRTSLDQYRRAAV----------RVEQLQNNMEIMGNELRTVSL---- 277

Query: 279 AKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQK 338
               D+ K       +  + A + ++S     M V A++A       +     I +PL++
Sbjct: 278 ----DLGKRKVEQRDREALAARSLLTSVALLAMVVGALAA-------WLITLQITQPLRQ 326

Query: 339 INHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRS 398
                A +A+GD+++      R E G L  S+  +     +L+  I+ G   L   A++ 
Sbjct: 327 TLAVAARIAKGDLSQVDTVQRRDEMGQLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQL 386

Query: 399 AEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKV 458
           A  SE    R+ +Q+ +TDQVA A+ ++  +  EVA++ + A      AD +A+ G Q V
Sbjct: 387 AASSEDTKLRINQQREETDQVATAMNQMSATVQEVAQNAEQASLAATNADQQAQVGDQVV 446

Query: 459 ATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAG 518
           +      EQLA  M+  +     L   S  IGSILDVI+ ++EQTNLLALNAAIEAARAG
Sbjct: 447 SEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILDVIKSVSEQTNLLALNAAIEAARAG 506

Query: 519 DAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTR 578
           +AGRGFAVVADEVR LA RT T+TEEI  +I++L   + +V  ++  S+  T   VE +R
Sbjct: 507 EAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSR 566

Query: 579 EMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESAS 638
               AL  I D + +I+ M  Q+A A++EQ VV++ +   V  + +V+ +T   + ++A+
Sbjct: 567 RAGHALSQITDTVSSIQGMNQQIATASEEQSVVAEQINRSVINVRDVSDQTSAASEQTAA 626

Query: 639 SSEVLADLAAKQQQLIAHFKV 659
           SS  L  L  + + ++  F +
Sbjct: 627 SSGELEQLGQQLRGMVGRFSI 647