Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  237 bits (605), Expect = 1e-66
 Identities = 146/382 (38%), Positives = 221/382 (57%), Gaps = 4/382 (1%)

Query: 280 KLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKI 339
           +L +    A ++A   R+  DA   +AN   + +   +A   L++ + TAR + +P+  +
Sbjct: 309 ELPESVLQAPAVALNQRL--DAHNQNANLTSLLIGLGTAIAGLLLVWLTARGVTRPILAV 366

Query: 340 NHELAYMA--RGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASR 397
              L  +A   GD+TRR++Y  + E G L+   +   DK   +++Q+    +   N A +
Sbjct: 367 AARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIAQVKGSLQEARNTADQ 426

Query: 398 SAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQK 457
           SA I+ +    +Q+Q  + +QVA A  E+  +A +VA +   A      AD  +++G Q 
Sbjct: 427 SAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQAARAADQASQEGLQL 486

Query: 458 VATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARA 517
           V +TR+  ++LA+ M +A+     L + S  IGS+L+VIR IAEQTNLLALNAAIEAARA
Sbjct: 487 VDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQTNLLALNAAIEAARA 546

Query: 518 GDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQT 577
           G+AGRGFAVVADEVR LA RTQ S EEI+ +IE LQ+ ++ VV  M   Q Q +    + 
Sbjct: 547 GEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAMHAGQRQAQDSAARM 606

Query: 578 REMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESA 637
            +   ALQ I + +  I +M  Q+A AA+EQ  V++ V  +V GI +V      +A ESA
Sbjct: 607 EQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIRDVTESLAGQADESA 666

Query: 638 SSSEVLADLAAKQQQLIAHFKV 659
             S+ L  LA +QQ L+  F+V
Sbjct: 667 RISQALNRLANQQQALMEQFRV 688