Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  209 bits (532), Expect = 3e-58
 Identities = 151/478 (31%), Positives = 252/478 (52%), Gaps = 14/478 (2%)

Query: 187 RDLKNIRRADAKTDLNELEKVLSKDIEMARKRLDRVLVPDDVKA---RYIANLNRLQELA 243
           R L N   A  +  L+ L++  S+ I+ AR+    ++V  D +A   +Y   LN+ ++L 
Sbjct: 71  RLLLNREPATQRDTLDMLDQRNSQ-IDRARQAYLPMIVAADEQAAFDQYGQLLNQYRQL- 128

Query: 244 LGQNGLLATMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAGSIAQQSRMLADAAV 303
                 + T+ +A +L+    + N+ + A+       +D + +       Q+R   + A 
Sbjct: 129 ---ESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRIN---TDQTRATNEKAA 182

Query: 304 SS-ANFWIMAVSAISAAVALVIG--YTTARSIQKPLQKINHELAYMARGDMTRRINYPTR 360
           +  A  + + +  + AA  L     +   RSI KP+++       +A GD+T  I     
Sbjct: 183 NQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAEGT 242

Query: 361 CEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVA 420
            E   L R++  + DK  + L QI   +  L + A     +++ +   +Q+Q ++ +Q A
Sbjct: 243 DEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAA 302

Query: 421 AAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITH 480
            A+TE+  +  EVAR+     +    A      GR  V  T    E+++ D+++   +  
Sbjct: 303 TAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLIT 362

Query: 481 KLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQT 540
            L E S +IG +LDVIRG+A+QTNLLALNAAIEAARAG+AGRGFAVVADEVRALA RTQ 
Sbjct: 363 HLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQ 422

Query: 541 STEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQ 600
           ST EI+ MI ++Q  +++ VE M  S E+  + +   R    AL +IA  +  I E    
Sbjct: 423 STSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLV 482

Query: 601 VAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFK 658
           +A AA+EQ  V++ V  ++  I +++ ++   A +++++S  L+ LA     L+A F+
Sbjct: 483 IASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFR 540