Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Methyl-accepting chemotaxis protein from Pseudomonas protegens RBAN4

 Score =  247 bits (631), Expect = 1e-69
 Identities = 197/670 (29%), Positives = 339/670 (50%), Gaps = 56/670 (8%)

Query: 3   LSIVQRIIAGFVLMLLLLILLGVISTLKIRGINDGLSEVSDRATPL--VMAVAGLKEALQ 60
           +S+  ++  GF L+LLL +L+             GLS V DR   L  +  +  L + L+
Sbjct: 12  VSVSLKLGIGFGLVLLLTLLITATGWT-------GLSRVIDRGDKLGNISVIYALTKDLR 64

Query: 61  ESNRWVLEFRTSEEAGE-----LPQLSNKFKDQQARFRQ------LSQQMNALTDSTESQ 109
            + R   E    E         L QL +  +D +A+ +Q      + QQ++A+    E Q
Sbjct: 65  IA-RLNYEMSRGEHGPAAVNDFLKQLDDGLQDARAQLQQPESITMVDQQLDAVA---EYQ 120

Query: 110 KQFQDVLQATNQFYSQADQVLTQHSEWVNALAQRRKLEIAFIRLEDTYQWAADLLLQQSS 169
           K F D+ +AT    +   Q+        NA+A+  ++E + ++ +   Q+ + + L +  
Sbjct: 121 KAFADMTRATANREAARSQLGATAD---NAVARVAEVENSLLQGDSVAQFNSVIDLSK-- 175

Query: 170 GQRSMRNKAELITSGIARDLKNIRRADAKTDLNELEKVLSKDIEMARKRLDRVLVPDDVK 229
               +  +A     G     K   +  A   L+ ++  L+          +   +P  + 
Sbjct: 176 ----LIQQARFQVRGYTYSAKPEAKQPA---LDAIDNALN----------NLTSLPSRLP 218

Query: 230 ARYIANLNRLQELALGQNGLLATMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAG 289
            +++ANL +  +        ++    A++   A L +       +A+   +L D++K   
Sbjct: 219 EQHVANLQQASDSLKAYRMAVSAYSDAEEASAAALKR-------MAAQGDRLMDLSKQL- 270

Query: 290 SIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG 349
           ++AQ ++  +DAA + +   I  + A+     L+  +   R I +PLQ+       +A G
Sbjct: 271 TVAQTTKRDSDAAQAKSTLLIATLLAM--LFGLIAAWAITRQITQPLQQTLKAAERVASG 328

Query: 350 DMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARV 409
           D+++ +    R E G L +++  +     EL+  I+ G   + + A + + ++E+  A V
Sbjct: 329 DLSQNLAVERRDELGQLQKAMQRMTVSLRELIGGISDGVTQIASAAEQLSAVTEQTSAGV 388

Query: 410 QEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLA 469
             QK +TDQVA A+ E+  +  EVAR+ + A +    AD +A++G + V       E+LA
Sbjct: 389 NSQKVETDQVATAMNEMAATVQEVARNAEEASEAAVAADQQAREGDRVVNEAIAQIERLA 448

Query: 470 SDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVAD 529
           S++  +      L + S+ IGS+LDVI+ +A+QTNLLALNAAIEAARAG+AGRGFAVVAD
Sbjct: 449 SEVGHSTEAMGHLKQESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVAD 508

Query: 530 EVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIAD 589
           EVR+LA RTQ STEEI  +I  LQ  ++QV   +  S+  T + VE TR    +L++I  
Sbjct: 509 EVRSLAQRTQQSTEEIAELIVGLQSGTQQVASTLDTSRSLTDSSVELTRRAGGSLENITR 568

Query: 590 RMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAK 649
            + AI+ M  Q+A AA++Q  V++ +   V  + +V+ +T   + E+A+SS  LA L   
Sbjct: 569 TVSAIQAMNQQIAAAAEQQSAVAEEINRSVLNVRDVSEQTSSASEETAASSAELARLGIH 628

Query: 650 QQQLIAHFKV 659
            Q L+  F+V
Sbjct: 629 LQSLVGRFRV 638