Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Methyl-accepting chemotaxis protein McpQ from Pseudomonas lactucae CFBP13502

 Score =  235 bits (599), Expect = 5e-66
 Identities = 163/523 (31%), Positives = 272/523 (52%), Gaps = 19/523 (3%)

Query: 155 DTYQWAADLLLQQSSGQRSMRNK----AELITSGIARDLKNIRRADAKTDLNELEKVLSK 210
           D Y+ A D ++Q  + + + R+K    A+     +    K + + D+ +  N +   LSK
Sbjct: 117 DQYKRAFDAMVQAGANRENARSKLGDTADNAVLKVGEVEKTLLQGDSVSQFNSIVS-LSK 175

Query: 211 DIEMARKRLDRVLVPDDVKARYIA------NLNRLQELA--LGQNGLLATMRKAQQLENA 262
            I+ AR ++        V+A   A       L ++ EL   L +       +    L+  
Sbjct: 176 LIQQARFQVRGYTYSGKVEAEQPALDAIDNALKKIAELTGQLPEQFSSNLQQAGVSLQAY 235

Query: 263 LLIQNQQVDASLASSLA------KLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAI 316
               +Q  D+ +AS+ A      + D +   +  + +   ++ D   + A   ++  + +
Sbjct: 236 RAAVSQYRDSQVASTAALKIMSAQGDILLDRSEKLTKSQTVVRDTDAAHARQLLLIATIL 295

Query: 317 SAAVALVIGYTTARSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADK 376
           +    LV  +   R I  PL +       +A GD++  +    + E G L R++  +   
Sbjct: 296 ALIFGLVAAWAITRQIIIPLNQTLQVAERVASGDLSHNLTSLRQDELGQLQRAMQSMTLG 355

Query: 377 TGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARS 436
             EL+  I+ G   + + A + + ++E+  A V  QK +TDQVA A+ E+  +  EVAR+
Sbjct: 356 LRELIGGISEGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVARN 415

Query: 437 TDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVI 496
            + A +    AD +A++G + V       E+LA+++ ++      L   S+ IGS+LDVI
Sbjct: 416 AEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTAAMGDLKRESDKIGSVLDVI 475

Query: 497 RGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESS 556
           + +A+QTNLLALNAAIEAARAG+AGRGFAVVADEVR+LA RTQ STEEI  +I  LQ  +
Sbjct: 476 KSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIAELIVGLQNGT 535

Query: 557 KQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVA 616
           +QV  +M  S+  T + VE TR   SAL++I   +  I+ M  Q+A AA++Q  V++ + 
Sbjct: 536 QQVATIMDNSRGLTDSSVELTRRAGSALENITRTVSTIQAMNSQIATAAEQQSAVAEEIN 595

Query: 617 HHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
             V  + +V+ +T   + E+A+SS  LA L    Q L+  F++
Sbjct: 596 RSVLNVRDVSEQTSAASEETAASSAELARLGNYLQTLVGRFRI 638