Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  226 bits (575), Expect = 3e-63
 Identities = 148/428 (34%), Positives = 228/428 (53%), Gaps = 10/428 (2%)

Query: 232 YIANLNRLQELALGQNGLLATMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAGSI 291
           Y+  LN +     G N  LA           LL Q + V   L    A++ D    A  +
Sbjct: 94  YLTVLNEVSGHIAGFNEKLAEY-------TGLLAQEKTVYDQLHQRAAQVVDRVNQA-YV 145

Query: 292 AQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGDM 351
           A+ + M A+   ++    I+  SA++  V L+  +   R I  PL+ +      +A GD+
Sbjct: 146 AEDASMQAELKKNTV--LIIGSSALALLVGLLAAWVITRLIVAPLRSVIRVAQQIAAGDL 203

Query: 352 TRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQE 411
           T ++    R E G L  ++  +A   G ++S + AG   L   A   + ++E+    V  
Sbjct: 204 TAKVEVTRRDEMGQLMLAMQQMAAGLGTIVSGLQAGIERLAGSAQSLSAVTEQTNLEVNS 263

Query: 412 QKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASD 471
           QK +T+QVA A+ ++  +  +VAR+ + A      AD + + G+Q V  +    EQLA  
Sbjct: 264 QKEETEQVATAMNQMTATVHDVARNAEEAALAAQTADDKVESGQQVVRQSMARIEQLADS 323

Query: 472 MESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEV 531
             SA      L     NIG++L+VI+ +AEQTNLLALNAAIEAARAG+ GRGFAVVADEV
Sbjct: 324 ATSASSSIESLSAEIQNIGTVLEVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 383

Query: 532 RALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRM 591
           RALA RTQ STEEI+ ++  L+ +++  V+ +  S E  +  V    + +SAL SIA  +
Sbjct: 384 RALARRTQQSTEEIERLVSALRAAAQSSVQQIRSSGELVKLAVSDALQTESALGSIAAAV 443

Query: 592 GAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQ 651
             I++M  Q+A AA+EQ  V++ +   VT I   A  +    R +A+SS  LA L  + +
Sbjct: 444 SLIQQMNQQIAAAAEEQSSVAEEINRSVTQIRASADHSSVAMRGNAASSVELAQLGGELR 503

Query: 652 QLIAHFKV 659
            ++ HF++
Sbjct: 504 SMVGHFRL 511